MirGeneDB 3.0

MirGeneDB ID

Bfl-Mir-12491

Family name MIR-12491 (all species)
Seed UCUUCCU
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID
Paralogues
Orthologues Bla-Mir-12491 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)
NC_049995.1: 4326455-4326514 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CCCCGAAAUAAAUCAAAGCCCAUGGCAGGGUACGGCUCUACAAGCCGGGGAUGAUGAAACAAAACUAUCUCUUCCUUGAAGAGUCGUACCUGGCUUUGGGUGCCGUCUUCACGUCGCUCA
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Structure
        10          20        30        40        50         
CCCCGAAAUAAAUCAAA--|    U   A            A    CC      GAUGAA 
                   GCCCA GGC GGGUACGGCUCU CAAG  GGGGAU      A
                   UGGGU UCG UCCAUGCUGAGA GUUC  UCUCUA      C
ACUCGCUGCACUUCUGCCG^    U   G            A    CU      UCAAAA 
.       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Bfl-Mir-12491_5p* (predicted)

mirBase accessionNone
Sequence
0- UACGGCUCUACAAGCCGGGGAU -22
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Mature sequence

Bfl-Mir-12491_3p (predicted)

mirBase accessionNone
Sequence
38- CUCUUCCUUGAAGAGUCGUACC -60
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