MirGeneDB 3.0

MirGeneDB ID

Bla-Mir-12491

Family name MIR-12491 (all species)
Seed UCUUGCU
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues
Orthologues Bfl-Mir-12491 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(BraLan2)
Sc0000058: 970724-970780 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGGGUCCCCGAAAUAAAACCCAUGGAAGGGAACGGCUCUGCAAGCCGGGGAUGAAACAAAACUAUCUCUUGCUUGAAGAGUCGUACUCGGCCUUGGGUGCUUUUCUUCACAACACAC
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Structure
        10          20        30        40        50        
AGGGUCCCCGAAAUAAA--|    U  AA   A        G     C      GAAAC 
                   ACCCA GG  GGG ACGGCUCU CAAGC GGGGAU     \
                   UGGGU CC  CUC UGCUGAGA GUUCG UCUCUA     A
CACACAACACUUCUUUUCG^    U  GG   A        A     U      UCAAA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Em Em Em Em
Star sequence

Bla-Mir-12491_5p*

mirBase accessionNone
Sequence
0- AACGGCUCUGCAAGCCGGGGAU -22
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Mature sequence

Bla-Mir-12491_3p

mirBase accessionNone
Sequence
35- CUCUUGCUUGAAGAGUCGUACU -57
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