| MirGeneDB ID | Bla-Mir-12491 |
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| Family name |
MIR-12491 (all species) |
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| Seed |
UCUUGCU |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bfl-Mir-12491
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| Node of Origin (locus) |
Branchiostoma
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| Node of Origin (family) |
Branchiostoma
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Genome context
(BraLan2) |
Sc0000058: 970724-970780 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGGGUCCCCGAAAUAAAACCCAUGGAAGGGAACGGCUCUGCAAGCCGGGGAUGAAACAAAACUAUCUCUUGCUUGAAGAGUCGUACUCGGCCUUGGGUGCUUUUCUUCACAACACAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGGGUCCCCGAAAUAAA--| U AA A G C GAAAC
ACCCA GG GGG ACGGCUCU CAAGC GGGGAU \
UGGGU CC CUC UGCUGAGA GUUCG UCUCUA A
CACACAACACUUCUUUUCG^ U GG A A U UCAAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Bla-Mir-12491_5p* |
| mirBase accession | None |
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| Sequence |
0- AACGGCUCUGCAAGCCGGGGAU -22
Get sequence
|
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| Mature sequence |
Bla-Mir-12491_3p |
| mirBase accession | None |
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| Sequence |
35- CUCUUGCUUGAAGAGUCGUACU -57
Get sequence
|
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