| MirGeneDB ID | Bfl-Mir-129-P7 |
|---|
| Family name |
MIR-129 (all species) |
|---|
| Seed |
CUUUUUG |
|---|
| Species |
Florida lancelet (Branchiostoma floridae) |
|---|
| MiRBase ID |
bfl-mir-129a
|
|---|
| Paralogues |
Bfl-Mir-129-P8
|
|---|
| Orthologues |
Bla-Mir-129-P7
|
|---|
| Node of Origin (locus) |
Branchiostoma
|
|---|
| Node of Origin (family) |
Chordata
|
|---|
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic) |
NC_049982.1: 9566952-9567011 [+]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
GCUGUGUGCAUCUCUCCCGGCGUGCCCUCUCCUUUUUGUGGUUUGGGGCUUUUGAGAUGAUGACAGAAAAGCCCUUACCUCAAAAGGGAUAGGGUUCUGCUGCAUGUAGCGACAUAUACG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCUGUGUGCAUCUCUCC- U-| C U UU GAGAUG
CGGCG GCCCU UCCUUUUUG GGU GGGGCUUUU \
GUCGU UGGGA AGGGAAAAC CCA UCCCGAAAA A
GCAUAUACAGCGAUGUAC CU^ U U U- GACAGU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Bfl-Mir-129-P7_5p |
| mirBase accession | MIMAT0010008 |
|---|
| Sequence |
0- CCUUUUUGUGGUUUGGGGCUUUU -23
Get sequence
|
|---|
| Star sequence |
Bfl-Mir-129-P7_3p* (predicted) |
| mirBase accession | MIMAT0010009 |
|---|
| Sequence |
38- AAGCCCUUACCUCAAAAGGGAU -60
Get sequence
|
|---|
