MirGeneDB 3.0
MirGeneDB ID

Bfl-Mir-4863

Family name MIR-4863 (all species)
Seed GGGCCAU
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-4863
Paralogues
Orthologues Bla-Mir-4863 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049983.1: 20597426-20597487 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-4863)		 Mir-2072 NC_049983.1: 20597094-20597149 [-] UCSC
Mir-4863 NC_049983.1: 20597426-20597487 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AUGUGACGAUGACACCUUGCCUGGUCAUGCAGACAACAUCAGAAUGUCCCUACGGGUUUGUGUAGUUAGUAGGGCCAUUUUGUGUUGUCAGCAGGACCAGUGCACUUCACUUCAAGGACCUU
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Structure
        10         20         30        40        50        60 
AUGUGACGAUGACACCU-   -|     A   A       U       U      GGGUUUG 
                  UGC CUGGUC UGC GACAACA CAGAAUG CCCUAC       \
                  ACG GACCAG ACG CUGUUGU GUUUUAC GGGAUG       U
UUCCAGGAACUUCACUUC   U^     G   A       -       C      AUUGAUG 
120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Bfl-Mir-4863_5p*
mirBase accessionMIMAT0020095
Sequence 
0- AGACAACAUCAGAAUGUCCCUAC -23
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Mature sequence

Bfl-Mir-4863_3p
mirBase accessionMIMAT0020096
Sequence 
40- AGGGCCAUUUUGUGUUGUCAGC -62
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