MirGeneDB ID | Bge-Mir-3770 |
Family name |
MIR-3770 (all species) |
Seed |
AUCCUGC |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
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Paralogues |
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Orthologues |
Dlo-Mir-3770
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Node of Origin (locus) |
Neoptera
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Node of Origin (family) |
Neoptera
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Genome context (Bger_2.0) |
KZ614626.1: 48115-48174 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
UGAACAAUCGAGAAAAUCCACAGUGGGUGAAAUCCUGCAUCAAGUGCGUUGCUUGGAUUUCAAACAGCAACGCUUUGACAGCAGGAAUUUAUCCAUGGUGUAUAUUCGUCAUCUUCUUCU
Get precursor sequence
|
Structure | 10 20 30 40 50
UGAACAAUCGAGAAAAUC-- A A A-| U UGGAU
CAC GUGGGUGAA UCCUGC UCAAG GCGUUGCU U
GUG UACCUAUUU AGGACG AGUUU CGCAACGA U
UCUUCUUCUACUGCUUAUAU G A AC^ - CAAAC
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
Comment | This miRNa locus is also present in hymenopterans. |
3' NTU |
Unknown
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Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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Mature sequence |
Bge-Mir-3770_5p |
mirBase accession | None |
Sequence |
0- AAUCCUGCAUCAAGUGCGUUGCU -23
Get sequence
|
Star sequence |
Bge-Mir-3770_3p* |
mirBase accession | None |
Sequence |
37- CAACGCUUUGACAGCAGGAAUUU -60
Get sequence
|