MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-3770

Family name MIR-3770 (all species)
Seed AUCCUGC
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues
Orthologues Bge-Mir-3770 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087225.1: 14931174-14931236 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUUCGUGUUAACAAUAGCAUACCGACGUAAUCCUGCAUCAAGUGCGUUGCGAGUGUCAAUAUAAGUUGCAAUGCAUUGCACGCAGGAUAGCGUUUGUGUGCUCAUAGACAACGACUUGGGG
Get precursor sequence
Structure
        10          20        30        40        50        60 
AUGUUCGUGUUAACAAU--|      C     A       AUCA          GAGUGUCA 
                   AGCAUAC GACGU AUCCUGC    AGUGCGUUGC        \
                   UCGUGUG UUGCG UAGGACG    UUACGUAACG        A
GGGGUUCAGCAACAGAUAC^      U     A       CACG          UUGAAUAU 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Sr Sr
Mature sequence

Dlo-Mir-3770_5p

mirBase accessionNone
Sequence
0- AAUCCUGCAUCAAGUGCGUUGC -22
Get sequence
Star sequence

Dlo-Mir-3770_3p* (predicted)

mirBase accessionNone
Sequence
41- AAUGCAUUGCACGCAGGAUAGC -63
Get sequence