| MirGeneDB ID | Bge-Novel-6-P1 |
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| Family name |
BGE-NOVEL-6 (all species) |
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| Seed |
UGAAAUG |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
Bge-Novel-6-P2
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614441.1: 1272250-1272309 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCUAUUGAAGCAGAAAUCUCUCUGCUCACGCAGGUAAUUGUCCAUAUCAGAUGUAAUAUUUGUAAUCAUUGAAAUGGACGAUUGUCUGUGUGAGUAGAAGAGAACUACAACUAUUUUAAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UCUAUUGAAGCAGAAAU- -| GU A A UAAUAU
CUC UCUGCUCACGCAG AAUUGUCCAU UCAG UG \
GAG AGAUGAGUGUGUC UUAGCAGGUA AGUU AC U
UAAUUUUAUCAACAUCAA A^ UG A - UAAUGU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Star sequence |
Bge-Novel-6-P1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CAGGUAAUUGUCCAUAUCAGAUG -23
Get sequence
|
|---|
| Mature sequence |
Bge-Novel-6-P1_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UUGAAAUGGACGAUUGUCUGUG -60
Get sequence
|
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