MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-12492

Family name MIR-12492 (all species)
Seed CAUGAUA
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues
Orthologues Bfl-Mir-12492 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(BraLan2)		 Sc0000149: 356131-356190 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AACGAGAGCUGACAUUUUCCCGCGGUCGGGUACUGUGUCCUUCCAUCAUAGUGUGUUUCUAUACGUCACCAUGAUACAGGACACAGCCCCUGACUGUGGGACCAAGCACGGCCGUGGUGA
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Structure
        10          20        30        40        50          
AACGAGAGCUGACAUUU--|            UA         UCC     A   UGUUUC 
                   UCCCGCGGUCGGG  CUGUGUCCU   AUCAU GUG      \
                   AGGGUGUCAGUCC  GACACAGGA   UAGUA CAC      U
AGUGGUGCCGGCACGAACC^            CC         CA-     C   UGCAUA 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
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Star sequence

Bla-Mir-12492_5p*
mirBase accessionNone
Sequence 
0- UACUGUGUCCUUCCAUCAUAGUG -23
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Mature sequence

Bla-Mir-12492_3p
mirBase accessionNone
Sequence 
38- CCAUGAUACAGGACACAGCCCC -60
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