MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-133-v2

Family name MIR-133 (all species)
Seed UGGUCCC
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-133-v1 
Orthologues Aae-Mir-133  Aga-Mir-133  Asu-Mir-133  Bfl-Mir-133-v2  Bge-Mir-133  Cbr-Mir-133  Cel-Mir-133  Cin-Mir-133  Cte-Mir-133  Dan-Mir-133  Dgr-Mir-133  Dlo-Mir-133  Dma-Mir-133  Dme-Mir-133  Dmo-Mir-133  Dpu-Mir-133  Dsi-Mir-133  Dya-Mir-133  Eba-Mir-133  Efe-Mir-133  Egr-Mir-133  Esc-Mir-133  Gpa-Mir-133  Gsp-Mir-133  Hme-Mir-133  Hru-Mir-133  Isc-Mir-133  Lan-Mir-133  Lgi-Mir-133  Lhy-Mir-133  Llo-Mir-133  Mgi-Mir-133  Mom-Mir-133  Obi-Mir-133  Ofu-Mir-133  Ovu-Mir-133  Pau-Mir-133  Pca-Mir-133  Pcr-Mir-133  Pdu-Mir-133  Pfl-Mir-133-v2  Pve-Mir-133  Rph-Mir-133  Sko-Mir-133-v2  Sma-Mir-133  Snu-Mir-133  Spu-Mir-133  Tca-Mir-133  Tur-Mir-133  War-Mir-133  Xbo-Mir-133 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 Sc0000092: 690181-690240 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
ACUUGCCAAGUAUCAGGGAUGCUGUGCUAAAGCUGGUAAAUUGGAACCAAAUCAACUCCUCAAUGGAUUUGGUCCCCUUCAACCAGCUGUAGCAUUGCAUUUUCAACCGCACAUUCAUCG
Get precursor sequence
Structure
        10          20        30        40        50         
ACUUGCCAAGUAUCAGG--|    U      A       AAAUU  A       CAACUC 
                   GAUGC GUGCUA AGCUGGU     GG ACCAAAU      C
                   UUACG UACGAU UCGACCA     CC UGGUUUA      U
GCUACUUACACGCCAACUU^    U      G       ACUUC  C       GGUAAC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut -2 on the 5p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Em Em Em Em
Star sequence

Bla-Mir-133-v2_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGCUGGUAAAUUGGAACCAAAU -22
Get sequence
Mature sequence

Bla-Mir-133-v2_3p
mirBase accessionNone
Sequence 
38- UUGGUCCCCUUCAACCAGCUGU -60
Get sequence