| MirGeneDB ID | Bla-Mir-4859 |
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| Family name |
MIR-4859 (all species) |
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| Seed |
GCAGCGA |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bfl-Mir-4859
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| Node of Origin (locus) |
Branchiostoma
|
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| Node of Origin (family) |
Branchiostoma
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Genome context
(BraLan2) |
Sc0000221: 303458-303517 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCUCCUGGACACACCUUCGGCCUGUUGGAAAGCAGCGAGCAUUACGGUCAUUCUGACGCUGGAGAAUAUGACAGUAAUGCCCGCUGACUUCUAAUGGAGCUCCCUCUCAUCACUUCUGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCUCCUGGACACACCUUC- -| AG A G UCUGACG
GGC CUGUUGGAA CAGCG GCAUUAC GUCAU C
UCG GGUAAUCUU GUCGC CGUAAUG CAGUA U
AGGUCUUCACUACUCUCCC A^ CA C A UAAGAGG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Bla-Mir-4859_5p |
| mirBase accession | None |
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| Sequence |
0- AGCAGCGAGCAUUACGGUCAUU -22
Get sequence
|
|---|
| Co-mature sequence |
Bla-Mir-4859_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UGACAGUAAUGCCCGCUGACUU -60
Get sequence
|
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