MirGeneDB ID | Bta-Mir-6119 |
Family name |
MIR-6119 (all species) |
Seed |
GAGGUAA |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-6119
|
Paralogues |
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Orthologues |
Eca-Mir-6119
|
Node of Origin (locus) |
Scrotifera
|
Node of Origin (family) |
Scrotifera
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Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 4150900-4150963 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
GUGUGUUUUCCUUAGCCUGGAGUCAUUUUGAGAGGUAAAAAAUUGAUUUGACUAGUUCUUUAACACAUCUAGCAAAUCAUUUUUUACUCUCCAAAAAGAACUCCAAACUUGCUAAAGAAGGGAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GUGUGUUUUCCUUAGCC-- -| A A - U A AGUUCUUU
UGGAG UC UUUUG GAG GUAAAAAAU GAUUUG CU \
ACCUC AG AAAAC CUC CAUUUUUUA CUAAAC GA A
AAGGGAAGAAAUCGUUCAA A^ A - U - - UCUACACA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Mature sequence |
Bta-Mir-6119_5p |
mirBase accession | MIMAT0024588 |
Sequence |
0- AGAGGUAAAAAAUUGAUUUGACU -23
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-6119-5p
|
Star sequence |
Bta-Mir-6119_3p* |
mirBase accession | MIMAT0024589 |
Sequence |
42- CAAAUCAUUUUUUACUCUCCAA -64
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-6119-3p
|