MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-6119

Family name MIR-6119 (all species)
Seed GAGGUAA
Species Cow (Bos taurus)
MiRBase ID bta-mir-6119
Paralogues
Orthologues Eca-Mir-6119 
Node of Origin (locus) Scrotifera
Node of Origin (family) Scrotifera
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037357.1: 4150900-4150963 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGUGUUUUCCUUAGCCUGGAGUCAUUUUGAGAGGUAAAAAAUUGAUUUGACUAGUUCUUUAACACAUCUAGCAAAUCAUUUUUUACUCUCCAAAAAGAACUCCAAACUUGCUAAAGAAGGGAA
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Structure
        10          20         30         40        50        60  
GUGUGUUUUCCUUAGCC--     -| A     A   -         U      A  AGUUCUUU 
                   UGGAG UC UUUUG GAG GUAAAAAAU GAUUUG CU        \
                   ACCUC AG AAAAC CUC CAUUUUUUA CUAAAC GA        A
AAGGGAAGAAAUCGUUCAA     A^ A     -   U         -      -  UCUACACA 
  120       110       100         90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-6119_5p

mirBase accessionMIMAT0024588
Sequence
0- AGAGGUAAAAAAUUGAUUUGACU -23
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Proposed targets TargetScanVert: bta-miR-6119-5p
Star sequence

Bta-Mir-6119_3p*

mirBase accessionMIMAT0024589
Sequence
42- CAAAUCAUUUUUUACUCUCCAA -64
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Proposed targets TargetScanVert: bta-miR-6119-3p