MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-7858

Family name MIR-7858 (all species)
Seed AGGAUUU
Species Cow (Bos taurus)
MiRBase ID bta-mir-7858
Paralogues
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037347.1: 10263064-10263122 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7858)		 Mir-7858 NC_037347.1: 10263064-10263122 [-] UCSC Ensembl
Mir-11968-P1 NC_037347.1: 10264042-10264099 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCUGCCCAUUUCUGCAAAAAAAAGCCAGCUAGGAUUUGGAAAGAUUGCUUUGAAUUUGUAGAUCAACGCAAUUCUUCAAAAUCUUAGCUGGGAGAAGAAUUGUCAUCUUUAUAAUGUC
Get precursor sequence
Structure
        10        20          30        40        50         
CCCUGCCCAUUUCUGCAAAAAAAAG--|            G   AG     UUUGAAUUU 
                           CCAGCUAGGAUUU GAA  AUUGC         \
                           GGUCGAUUCUAAA CUU  UAACG         G
CUGUAAUAUUUCUACUGUUAAGAAGAG^            A   CU     CAACUAGAU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-7858_5p
mirBase accessionNone
Sequence 
0- UAGGAUUUGGAAAGAUUGCUUU -22
Get sequence
Star sequence

Bta-Mir-7858_3p*
mirBase accessionMIMAT0030433
Sequence 
37- CGCAAUUCUUCAAAAUCUUAGC -59
Get sequence
Proposed targets TargetScanVert: bta-miR-7858