MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-7861-v2

Family name MIR-7861 (all species)
Seed ACACUCA
Species Cow (Bos taurus)
MiRBase ID bta-mir-7861
Paralogues Bta-Mir-7861-v1 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037340.1: 13066645-13066704 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7861-v2)
Mir-7861-v2 NC_037340.1: 13066645-13066704 [-] UCSC Ensembl
Mir-7861-v1 NC_037340.1: 13066646-13066703 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAGUCAGACGCGACUGAGCAUGCACACACACACUCAGAUAAAGUAGGCACUUUUUGGUUCUUGAAAUGCUACCUAGUCUGAGUGAGUGAGUGUGUGUACGCAUGGCAUCGUGCUUCCC
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Structure
        10          20        30        40        50          
AAGAGUCAGACGCGACU--|A        A   A         AAA    G  CUUUUUGG 
                   G GCAUGCAC CAC CACUCAGAU   GUAG CA        \
                   C UGUGUGUG GUG GUGAGUCUG   CAUC GU        U
CCCUUCGUGCUACGGUACG^A        A   A         AUC    -  AAAGUUCU 
.       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-7861-v2_5p

mirBase accessionNone
Sequence
0- CACACUCAGAUAAAGUAGGCACU -23
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Star sequence

Bta-Mir-7861-v2_3p* (predicted)

mirBase accessionMIMAT0030441
Sequence
38- UGCUACCUAGUCUGAGUGAGUG -60
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Proposed targets TargetScanVert: bta-miR-7861