| MirGeneDB ID | Cfa-Mir-12464 |
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| Family name |
MIR-12464 (all species) |
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| Seed |
UCAUCAU |
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| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Eca-Mir-12464
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| Node of Origin (locus) |
Scrotifera
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| Node of Origin (family) |
Scrotifera
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Genome context
(canFam3_add) |
chr30: 27388078-27388136 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACCUCUCAGCAAUCAACAGUGAUGGUAACAAUGAUGAUGAUGGUGGUGAAGAUGGGUUGCAUUUUCCUUCAUCAUAGUCAUCAUUGACCUUAUCAUCAUCUUCAUCAUCGUGGUCAUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACCUCUCAGCAAUCAACA--| CAA G AUGGGUU
GUGAUGGUAA UGAUGAUGAU GUGGUGAAG \
UACUACUAUU GUUACUACUG UACUACUUC G
ACUACUGGUGCUACUACUUC^ CCA A CUUUUAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| An |
An |
An |
Bl |
Ce |
Co |
He |
Hi |
Hi |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Star sequence |
Cfa-Mir-12464_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AUGAUGAUGAUGGUGGUGAAGA -22
Get sequence
|
|---|
| Mature sequence |
Cfa-Mir-12464_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUCAUCAUAGUCAUCAUUGACC -59
Get sequence
|
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