| MirGeneDB ID | Eca-Mir-12464 |
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| Family name |
MIR-12464 (all species) |
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| Seed |
CGAUGAU |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cfa-Mir-12464
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| Node of Origin (locus) |
Scrotifera
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| Node of Origin (family) |
Scrotifera
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009148.1: 130554735-130554793 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAUAUCAUUCAGCAACCAAUGGUGACAGUAACGAUGAUGAUGGUGGUGAAGAUGGGUUGCCUUUUUCUUCAUCAUAAUCAUCAUUGACAUUAUCAUCAUUAUUAACAUCAUCAUCUUCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAUAUCAUUCAGCAACC--| C AA G UGGGUU
AAUGGUGA AGU CGAUGAUGAU GUGGUGAAGA \
UUACUACU UUA GUUACUACUA UACUACUUCU G
ACUUCUACUACUACAAUUA^ A CA A UUUUCC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-12464_5p |
| mirBase accession | None |
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| Sequence |
0- ACGAUGAUGAUGGUGGUGAAGA -22
Get sequence
|
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| Star sequence |
Eca-Mir-12464_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- UUCAUCAUAAUCAUCAUUGACA -59
Get sequence
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