| MirGeneDB ID | Cja-Mir-1266 |
|---|---|
| Family name | MIR-1266 (all species) |
| Seed | UUAGGGG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-1266 Mml-Mir-1266 Pab-Mir-1266 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 35779173-35779229 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGCCUUGUUUGAUGCUGGACAGGUAGUGUCCUUAGGGGCUAUAGAACAGGGCUGGGAUUACUGAAGCCUGUUCUAUGCCCUGAGGGACACUGAGCAUGUCAUUCCCCUUCUCCAAGUGet precursor sequence |
| Structure | 10 20 30 40 50 GGCCUUGUUUGAUGCUGG GG--| A U G UGGGAU ACA UAGUGUCCUU GGGGC AUAGAACAGG C \ UGU GUCACAGGGA UCCCG UAUCUUGUCC G U UGAACCUCUUCCCCUUAC ACGA^ G - - AAGUCA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-1266_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CUUAGGGGCUAUAGAACAGGGC -22
Get sequence
|
| Star sequence | Cja-Mir-1266_3p* (predicted) |
| mirBase accession | None |
| Sequence |
35- GCCUGUUCUAUGCCCUGAGGGA -57
Get sequence
|
