| MirGeneDB ID | Cja-Mir-1266 |
|---|
| Family name |
MIR-1266 (all species) |
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| Seed |
UUAGGGG |
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| Species |
White-tufted-ear marmoset (Callithrix jacchus) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Hsa-Mir-1266
Mml-Mir-1266
Pab-Mir-1266
|
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| Node of Origin (locus) |
Simiiformes
|
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| Node of Origin (family) |
Simiiformes
|
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Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 35779173-35779229 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGCCUUGUUUGAUGCUGGACAGGUAGUGUCCUUAGGGGCUAUAGAACAGGGCUGGGAUUACUGAAGCCUGUUCUAUGCCCUGAGGGACACUGAGCAUGUCAUUCCCCUUCUCCAAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGCCUUGUUUGAUGCUGG GG--| A U G UGGGAU
ACA UAGUGUCCUU GGGGC AUAGAACAGG C \
UGU GUCACAGGGA UCCCG UAUCUUGUCC G U
UGAACCUCUUCCCCUUAC ACGA^ G - - AAGUCA
110 100 90 80 70 60 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Cja-Mir-1266_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- CUUAGGGGCUAUAGAACAGGGC -22
Get sequence
|
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| Star sequence |
Cja-Mir-1266_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
35- GCCUGUUCUAUGCCCUGAGGGA -57
Get sequence
|
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