MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-1266

Family name MIR-1266 (all species)
Seed CUCAGGG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Cja-Mir-1266  Hsa-Mir-1266  Mml-Mir-1266 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054695.2: 55227032-55227089 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCUUGUUUGAUGCUAGACAGGUAGUGUCCCUCAGGGCUGUAGAACAGGGCUGGGAUUACUAAAGCCCUGUUCUAUGCCCUGAGGGACACUGAGCAUGUCAUUUCACUUCUCAGAGU
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Structure
        10        20          30        40        50         
GGCCUUGUUUGAUGCUAG   GG--|               U             GGGAU 
                  ACA    UAGUGUCCCUCAGGGC GUAGAACAGGGCU     \
                  UGU    GUCACAGGGAGUCCCG UAUCUUGUCCCGA     U
UGAGACUCUUCACUUUAC   ACGA^               -             AAUCA 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Br Br Li Li
Mature sequence

Pab-Mir-1266_5p

mirBase accessionNone
Sequence
0- CCUCAGGGCUGUAGAACAGGGCU -23
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Star sequence

Pab-Mir-1266_3p* (predicted)

mirBase accessionNone
Sequence
36- CCCUGUUCUAUGCCCUGAGGGA -58
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