MirGeneDB ID | Pab-Mir-1266 |
Family name |
MIR-1266 (all species) |
Seed |
CUCAGGG |
Species |
Sumatran orangutan (Pongo abelii) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Cja-Mir-1266
Hsa-Mir-1266
Mml-Mir-1266
|
Node of Origin (locus) |
Simiiformes
|
Node of Origin (family) |
Simiiformes
|
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054695.2: 55227032-55227089 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGCCUUGUUUGAUGCUAGACAGGUAGUGUCCCUCAGGGCUGUAGAACAGGGCUGGGAUUACUAAAGCCCUGUUCUAUGCCCUGAGGGACACUGAGCAUGUCAUUUCACUUCUCAGAGU
Get precursor sequence
|
Structure | 10 20 30 40 50
GGCCUUGUUUGAUGCUAG GG--| U GGGAU
ACA UAGUGUCCCUCAGGGC GUAGAACAGGGCU \
UGU GUCACAGGGAGUCCCG UAUCUUGUCCCGA U
UGAGACUCUUCACUUUAC ACGA^ - AAUCA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Pab-Mir-1266_5p |
mirBase accession | None |
Sequence |
0- CCUCAGGGCUGUAGAACAGGGCU -23
Get sequence
|
Star sequence |
Pab-Mir-1266_3p* (predicted) |
mirBase accession | None |
Sequence |
36- CCCUGUUCUAUGCCCUGAGGGA -58
Get sequence
|