| MirGeneDB ID | Pab-Mir-1266 |
|---|---|
| Family name | MIR-1266 (all species) |
| Seed | CUCAGGG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-1266 Hsa-Mir-1266 Mml-Mir-1266 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054695.2: 55227032-55227089 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGCCUUGUUUGAUGCUAGACAGGUAGUGUCCCUCAGGGCUGUAGAACAGGGCUGGGAUUACUAAAGCCCUGUUCUAUGCCCUGAGGGACACUGAGCAUGUCAUUUCACUUCUCAGAGUGet precursor sequence |
| Structure | 10 20 30 40 50 GGCCUUGUUUGAUGCUAG GG--| U GGGAU ACA UAGUGUCCCUCAGGGC GUAGAACAGGGCU \ UGU GUCACAGGGAGUCCCG UAUCUUGUCCCGA U UGAGACUCUUCACUUUAC ACGA^ - AAUCA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Pab-Mir-1266_5p |
| mirBase accession | None |
| Sequence |
0- CCUCAGGGCUGUAGAACAGGGCU -23
Get sequence
|
| Star sequence | Pab-Mir-1266_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- CCCUGUUCUAUGCCCUGAGGGA -58
Get sequence
|
