| MirGeneDB ID | Cja-Mir-1286 |
|---|---|
| Family name | MIR-1286 (all species) |
| Seed | GUGGGAC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-1286 Pab-Mir-1286 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021915.1: 209464348-209464403 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUGGCCACUUCCUCAUUAGCAUCCUCUGGGGACUCAGCUUGCUCUGGCUGCUGGAUUGAAUUAGCUGUGGGACCAAGAUGAGCCCUUGGUGGAGACAGGAUUCUCCAGAUAAUUAGGet precursor sequence |
| Structure | 10 20 30 40 50 CUGGCCACUUCCUCAUUAGCA--| U UG A G C G U UGGAU UCC C GGG CUCA CUUG UCU GC GC U AGG G UCC GAGU GAAC AGG UG CG G GAUUAAUAGACCUCUUAGGACAG^ U GU C A C G U AUUAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-1286_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GACUCAGCUUGCUCUGGCUGC -21
Get sequence
|
| Mature sequence | Cja-Mir-1286_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- UGUGGGACCAAGAUGAGCCCU -56
Get sequence
|
