| MirGeneDB ID | Pab-Mir-1286 |
|---|---|
| Family name | MIR-1286 (all species) |
| Seed | GCAGGAC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-1286 Hsa-Mir-1286 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM068844.1: 27844084-27844139 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCGGCCACUUCCUCAUUAGCGUCCUCUGGGGACUCAGCUUGCUCUGGCUGCUGGAUUGAAUUAGCUGCAGGACCAAGAUGAGCCCUUGGUGGAGAUAGGAUUCUCCAGAUAAUUAGGet precursor sequence |
| Structure | 10 20 30 40 50 CCGGCCACUUCCUCAUUAGCG--| U UG A G C G U UGGAU UCC C GGG CUCA CUUG UCU GC GC U AGG G UCC GAGU GAAC AGG CG CG G GAUUAAUAGACCUCUUAGGAUAG^ U GU C A C A U AUUAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-1286_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GACUCAGCUUGCUCUGGCUGC -21
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|
| Mature sequence | Pab-Mir-1286_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- UGCAGGACCAAGAUGAGCCCU -56
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|
