MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-1294

Family name MIR-1294 (all species)
Seed GUGAGGU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-1294  Mml-Mir-1294  Pab-Mir-1294 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021916.1: 51620368-51620429 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUCUGUUGAUUUAUGAUCUCGCUGAGUCCUGUGAGGUUGGCAUUGUUGUCUGGCAUUGUCUGAUGAUAUACAACAGUGCCAACCUCACAGGACUCAGUGAGAUGAAACUGAUUAGGAUUAG
Get precursor sequence
Structure
        10          20        30        40        50        60
GAUCUGUUGAUUUAUGA--|                                CUGGCAUUG 
                   UCUCGCUGAGUCCUGUGAGGUUGGCAUUGUUGU         U
                   AGAGUGACUCAGGACACUCCAACCGUGACAACA         C
GAUUAGGAUUAGUCAAAGU^                                UAUAGUAGU 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Cja-Mir-1294_5p (predicted)
mirBase accessionNone
Sequence 
0- UGUGAGGUUGGCAUUGUUGUCU -22
Get sequence
Star sequence

Cja-Mir-1294_3p* (predicted)
mirBase accessionNone
Sequence 
40- ACAACAGUGCCAACCUCACAGG -62
Get sequence