| MirGeneDB ID | Cja-Mir-1295 |
|---|---|
| Family name | MIR-1295 (all species) |
| Seed | UAGGCUG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-1295 Mml-Mir-1295 Pab-Mir-1295 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021932.1: 25074233-25074293 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGUUUGGGAAGUUCUUGAAAAAGAAUAUUUUACCCAGAUCCAUGGCCUAAUCAUAGAUGUGACCUGUAAUUAGGCUGCAGAUCUGGGUGAAAUGCCCUCCUUCUGUGACCAAAGAAAGUGAGet precursor sequence |
| Structure | 10 20 30 40 50 UGUUUGGGAAGUUCUUGAAAA--| AA CA CAUAGAUG AG UAUUUUACCCAGAUC UGGCCUAAU \ UC GUAAAGUGGGUCUAG GUCGGAUUA U AGUGAAAGAAACCAGUGUCUUCC^ CC AC AUGUCCAG . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Cja-Mir-1295_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UACCCAGAUCCAUGGCCUAAUC -22
Get sequence
|
| Mature sequence | Cja-Mir-1295_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- UUAGGCUGCAGAUCUGGGUGAA -61
Get sequence
|
