| MirGeneDB ID | Pab-Mir-1295 |
|---|
| Family name |
MIR-1295 (all species) |
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| Seed |
UAGGCCG |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Cja-Mir-1295
Hsa-Mir-1295
Mml-Mir-1295
|
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| Node of Origin (locus) |
Simiiformes
|
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| Node of Origin (family) |
Simiiformes
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054679.2: 78979693-78979753 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUGGGGAGCUCCUGAGAAAAGAGGACAUUUUCCCCAGAUCCGUGGCCUAUUCAGAAAUGUGGCCUGUGAUUAGGCCGCAGAUCUGGGUGAAAUGUCCUCCUUCUGUGACCAAAGAAGGUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUGGGGAGCUCCUGAGAAAA--| UC C U AGAAAUG
GAGGACAUUU CCCAGAUC GUGGCCUA UC \
CUCCUGUAAA GGGUCUAG CGCCGGAU AG U
AGUGGAAGAAACCAGUGUCUUC^ GU A U UGUCCGG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-1295_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UCCCCAGAUCCGUGGCCUAUUC -22
Get sequence
|
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| Mature sequence |
Pab-Mir-1295_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
39- UUAGGCCGCAGAUCUGGGUGAA -61
Get sequence
|
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