| MirGeneDB ID | Cja-Mir-3145 |
|---|---|
| Family name | MIR-3145 (all species) |
| Seed | GGUAUUU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-3145 Mml-Mir-3145 Pab-Mir-3145 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021918.1: 141265861-141265922 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGAAAAAAAUGUAUUUGUUUGUAUGAGUUUAAUUCCAGACAUUCAAAACCCACUGUUGAAUGGAAUGAGGUAUUUUGAGUGUUUGGAAUUGAAUUUGUAUAAACUGAUAGACCAAUACCAGUGet precursor sequence |
| Structure | 10 20 30 40 50
AGAAAAAAAUGUAUUUG-- UG -- -| CUGUUG
UUUGUA AGUUUAAUUCCAGACAUUCAAA ACC CA \
AAAUAU UUAAGUUAAGGUUUGUGAGUUU UGG GU A
UGACCAUAACCAGAUAGUC GU UA A^ AAGGUA
120 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Cja-Mir-3145_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AAUUCCAGACAUUCAAAACCCA -22
Get sequence
|
| Mature sequence | Cja-Mir-3145_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AGGUAUUUUGAGUGUUUGGAAUUGA -62
Get sequence
|
