| MirGeneDB ID | Pab-Mir-3145 |
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| Family name |
MIR-3145 (all species) |
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| Seed |
GGUAUUU |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Cja-Mir-3145
Hsa-Mir-3145
Mml-Mir-3145
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| Node of Origin (locus) |
Simiiformes
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| Node of Origin (family) |
Simiiformes
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054684.2: 139976954-139977015 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGAAAAAAAUGUAUUUGUUUAUAUGAGUUCAACUCCAAGCAUUCAAAACUCAUUGUUGAAUGGAAUGAGGUAUUUUGAGUGUUUGGAAUUGAACUCGUAUACACUGAUACACCGAUACCAGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGAAAAAAAUGUAUUUGUU-- C ---| UUGUUG
UAUAUGAGUUCAA UCCAAGCAUUCAAAA CUCA \
AUAUGCUCAAGUU AGGUUUGUGAGUUUU GAGU A
UGACCAUAGCCACAUAGUCAC A AUG^ AAGGUA
120 110 100 90 80 70 60 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-3145_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- AACUCCAAGCAUUCAAAACUCA -22
Get sequence
|
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| Mature sequence |
Pab-Mir-3145_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- AGGUAUUUUGAGUGUUUGGAAUUGA -62
Get sequence
|
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