| MirGeneDB ID | Pab-Mir-3145 |
|---|---|
| Family name | MIR-3145 (all species) |
| Seed | GGUAUUU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-3145 Hsa-Mir-3145 Mml-Mir-3145 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054684.2: 139976954-139977015 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGAAAAAAAUGUAUUUGUUUAUAUGAGUUCAACUCCAAGCAUUCAAAACUCAUUGUUGAAUGGAAUGAGGUAUUUUGAGUGUUUGGAAUUGAACUCGUAUACACUGAUACACCGAUACCAGUGet precursor sequence |
| Structure | 10 20 30 40 50 AGAAAAAAAUGUAUUUGUU-- C ---| UUGUUG UAUAUGAGUUCAA UCCAAGCAUUCAAAA CUCA \ AUAUGCUCAAGUU AGGUUUGUGAGUUUU GAGU A UGACCAUAGCCACAUAGUCAC A AUG^ AAGGUA 120 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-3145_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AACUCCAAGCAUUCAAAACUCA -22
Get sequence
|
| Mature sequence | Pab-Mir-3145_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AGGUAUUUUGAGUGUUUGGAAUUGA -62
Get sequence
|
