| MirGeneDB ID | Cja-Mir-3187 |
|---|---|
| Family name | MIR-3187 (all species) |
| Seed | UGGCCAU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-3187 Mml-Mir-3187 Pab-Mir-3187 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021936.1: 498263-498322 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGCGGGGUCGUCCAGCGAGGGCGCGCUGGCCCUGGGCAGCGUGUGGCUGAAGGUCACCAUGUUCUCCUUGGCCAUGGGGCUGCGCGGCGCCAGCAGGUCCACGUCCACGCUGGCGCGCUUGet precursor sequence |
| Structure | 10 20 30 40 50 CGCGGGGUCGUCCAGCGA-- GC C G GU-| G UCACC GGGC GCUGGC CUG GCAGC GUGGCU AAGG A CCUG CGACCG GGC CGUCG UACCGG UUCC U UUCGCGCGGUCGCACCUGCA GA C G GGG^ - UCUUG . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Cja-Mir-3187_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCUGGGCAGCGUGUGGCUGAAGG -23
Get sequence
|
| Mature sequence | Cja-Mir-3187_3p |
| mirBase accession | None |
| Sequence |
37- UUGGCCAUGGGGCUGCGCGGCGC -60
Get sequence
|
