| MirGeneDB ID | Pab-Mir-3187 |
|---|---|
| Family name | MIR-3187 (all species) |
| Seed | UGGCCAU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-3187 Hsa-Mir-3187 Mml-Mir-3187 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054699.2: 561286-561345 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGCGGGGUCGUCCAGCGAGGGUGCGCUGGCCCUGGGCAGCGUGUGGCUGAAGGUCACCAUGUUCUCCUUGGCCAUGGGGCUGCGCGGGGCCAGCAGGUCCACGUCCACGCUGGCGCGCUUGet precursor sequence |
| Structure | 10 20 30 40 50 CGCGGGGUCGUCCAGCGA-- UGC G GU-| G UCACC GGG GCUGGCCCUG GCAGC GUGGCU AAGG A CCU CGACCGGGGC CGUCG UACCGG UUCC U UUCGCGCGGUCGCACCUGCA GGA G GGG^ - UCUUG . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Pab-Mir-3187_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCUGGGCAGCGUGUGGCUGAAGG -23
Get sequence
|
| Mature sequence | Pab-Mir-3187_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- UUGGCCAUGGGGCUGCGCGGGGC -60
Get sequence
|
