| MirGeneDB ID | Cja-Mir-4424 |
|---|
| Family name |
MIR-4424 (all species) |
|---|
| Seed |
CCCAUUU |
|---|
| Species |
White-tufted-ear marmoset (Callithrix jacchus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Hsa-Mir-4424
Mml-Mir-4424
Pab-Mir-4424
|
|---|
| Node of Origin (locus) |
Simiiformes
|
|---|
| Node of Origin (family) |
Simiiformes
|
|---|
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021932.1: 18120509-18120568 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAAAUUGGACCCUUAUCUUACAUCACACAUGAAGUUAACUUGACAUGGACUGACUUUUCCAUUAGUUAGCCCAUUUCAAGUUAAUUUUGUGUGUGAUGUAGUCCCAGCUACUCAGGAGGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAAAUUGGACCCUUAUC--| UG C A ACUUUU
UUACAUCACACA AAGUUAACUUGA AUGG CUG C
GAUGUAGUGUGU UUUAAUUGAACU UACC GAU C
CGGAGGACUCAUCGACCCU^ GU U C UGAUUA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Cja-Mir-4424_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GAAGUUAACUUGACAUGGACUG -22
Get sequence
|
|---|
| Mature sequence |
Cja-Mir-4424_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- GCCCAUUUCAAGUUAAUUUUGU -60
Get sequence
|
|---|
