| MirGeneDB ID | Cja-Mir-4424 |
|---|---|
| Family name | MIR-4424 (all species) |
| Seed | CCCAUUU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-4424 Mml-Mir-4424 Pab-Mir-4424 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021932.1: 18120509-18120568 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GAAAUUGGACCCUUAUCUUACAUCACACAUGAAGUUAACUUGACAUGGACUGACUUUUCCAUUAGUUAGCCCAUUUCAAGUUAAUUUUGUGUGUGAUGUAGUCCCAGCUACUCAGGAGGCGet precursor sequence |
| Structure | 10 20 30 40 50 GAAAUUGGACCCUUAUC--| UG C A ACUUUU UUACAUCACACA AAGUUAACUUGA AUGG CUG C GAUGUAGUGUGU UUUAAUUGAACU UACC GAU C CGGAGGACUCAUCGACCCU^ GU U C UGAUUA . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-4424_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GAAGUUAACUUGACAUGGACUG -22
Get sequence
|
| Mature sequence | Cja-Mir-4424_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- GCCCAUUUCAAGUUAAUUUUGU -60
Get sequence
|
