| MirGeneDB ID | Pab-Mir-4424 |
|---|
| Family name |
MIR-4424 (all species) |
|---|
| Seed |
UCCAUUU |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
|---|
| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Cja-Mir-4424
Hsa-Mir-4424
Mml-Mir-4424
|
|---|
| Node of Origin (locus) |
Simiiformes
|
|---|
| Node of Origin (family) |
Simiiformes
|
|---|
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054679.2: 71262704-71262763 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GAAAUUGGACCAUUAUCUUACAUCACACACAGAGUUAACUUGAAAUGGACUAAUUUUUCCACUAGUUAGUCCAUUUCAAGUUAACUCUGUGUGUGAUGUAGUCCAGAAACUCUGGAGGCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAAAUUGGACCAUUAUC--| AUUUUU
UUACAUCACACACAGAGUUAACUUGAAAUGGACUA C
GAUGUAGUGUGUGUCUCAAUUGAACUUUACCUGAU C
UCGGAGGUCUCAAAGACCU^ UGAUCA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-4424_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGAGUUAACUUGAAAUGGACUA -22
Get sequence
|
|---|
| Mature sequence |
Pab-Mir-4424_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- GUCCAUUUCAAGUUAACUCUGU -60
Get sequence
|
|---|
