MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-5586

Family name MIR-5586 (all species)
Seed UAUCCAG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-5586  Mml-Mir-5586  Pab-Mir-5586 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021924.1: 90224713-90224772 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGACAGCAUAUCAUUGGGUCUUACUUCUUUAUCCAGCUUGCCACUCUAUGCCUUUUAAAUGGGGCUCAGAGUGGCUAGCUGGAUGAAGAAGCAAGACCCAUUCAAGAUUAUUAUUGAU
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Structure
        10          20        30        40        50         
GAAGACAGCAUAUCAUU--|      A               U        AU CCUUUU 
                   GGGUCUU CUUCUUUAUCCAGCU GCCACUCU  G      A
                   CCCAGAA GAAGAAGUAGGUCGA CGGUGAGA  C      A
UAGUUAUUAUUAGAACUUA^      C               U        CU GGGGUA 
.       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-5586_5p (predicted)
mirBase accessionNone
Sequence 
0- UUAUCCAGCUUGCCACUCUAUG -22
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Star sequence

Cja-Mir-5586_3p* (predicted)
mirBase accessionNone
Sequence 
38- CAGAGUGGCUAGCUGGAUGAAG -60
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