MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-577

Family name MIR-577 (all species)
Seed UAGAUAA
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-577  Mml-Mir-577  Pab-Mir-577 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021917.1: 78687398-78687456 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGGCAGGCUGUAUUUGGAGGAAUGAAGAGUAGAUAAGGUACUGGUACCUGAUGAAUCUGAGGCCAGGUUUCAAUACUUUAUCUACUUUUCAUUUCCCCAAACGUACUUACUGUAGGU
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Structure
        10          20        30        40        50         
AAUGGCAGGCUGUAUUU--| A                      C   U     AUGAAU 
                   GG GGAAUGAAGAGUAGAUAAGGUA UGG ACCUG      \
                   CC CUUUACUUUUCAUCUAUUUCAU ACU UGGAC      C
UGGAUGUCAUUCAUGCAAA^ C                      A   U     CGGAGU 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-577_5p (predicted)
mirBase accessionNone
Sequence 
0- GUAGAUAAGGUACUGGUACCUG -22
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Star sequence

Cja-Mir-577_3p* (predicted)
mirBase accessionNone
Sequence 
37- GGUUUCAAUACUUUAUCUACUU -59
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