| MirGeneDB ID | Pab-Mir-577 |
|---|---|
| Family name | MIR-577 (all species) |
| Seed | UAGAUAA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-577 Hsa-Mir-577 Mml-Mir-577 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 136456920-136456978 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAAGGCAGGCUGUAUUUGGGGGAGUGAAGAGUAGAUAAAAUAUUGGUACCUGAUGAAUCUGAGGCCAGGUUUCAAUACUUUAUCUGCUCUUCAUUUCCCCAUAUCUACUUACUGUAGGUGet precursor sequence |
| Structure | 10 20 30 40 50 CAAGGCAGGCUGUAUUU--| A U AUGAAU GGGGGAGUGAAGAGUAGAUAAA UAUUGG ACCUG \ CCCCUUUACUUCUCGUCUAUUU AUAACU UGGAC C UGGAUGUCAUUCAUCUAUA^ C U CGGAGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-577_5p |
| mirBase accession | None |
| Sequence |
0- GUAGAUAAAAUAUUGGUACCUG -22
Get sequence
|
| Star sequence | Pab-Mir-577_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- GGUUUCAAUACUUUAUCUGCUC -59
Get sequence
|
