| MirGeneDB ID | Cja-Mir-616 |
|---|---|
| Family name | MIR-616 (all species) |
| Seed | CUCAAAA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-616 Mml-Mir-616 Pab-Mir-616 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021923.1: 58617746-58617808 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GUGGUCAGUAAUUACCUUAGGUAAACCUCUGCUCAAAACCCUCCAGUGACUUCCAUGACAUGAAAUAGGAAUUCACUGGAGGAUUUUGAGCAGAGGAAUGACCUGUUUUAAAAGGCUCCUCCCGet precursor sequence |
| Structure | 10 20 30 40 50 60 GUGGUCAGUAAUUACCU- AAA-| C C AUGACA UAGGU CCUCUGCUCAAAA CCUCCAGUGA UUCC \ GUCCA GGAGACGAGUUUU GGAGGUCACU AAGG U CCCUCCUCGGAAAAUUUU GUAA^ A U AUAAAG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-616_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- GCUCAAAACCCUCCAGUGACUUCC -24
Get sequence
|
| Star sequence | Cja-Mir-616_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- AAUUCACUGGAGGAUUUUGAGCAG -63
Get sequence
|
