| MirGeneDB ID | Pab-Mir-616 |
|---|---|
| Family name | MIR-616 (all species) |
| Seed | CUCAAAA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-616 Hsa-Mir-616 Mml-Mir-616 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054689.2: 55446770-55446832 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGGUCAGGAAUUACCUUAGGUAAUUCCUCCACUCAAAACCCUCCAGUGACUUCCAUGACAUGAAAUAGGAAGUCAUUGGAGGGUUUUGAGCAGAGGAAUGACCUGUUUUAAAAGGCUCACUCAGet precursor sequence |
| Structure | 10 20 30 40 50 60 UGGUCAGGAAUUACCUU--| A CA AUGACA AGGU AUUCCUC CUCAAAACCCUCCAGUGACUUCC \ UCCA UAAGGAG GAGUUUUGGGAGGUUACUGAAGG U ACUCACUCGGAAAAUUUUG^ G AC AUAAAG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Pab-Mir-616_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUCAAAACCCUCCAGUGACUUCC -24
Get sequence
|
| Star sequence | Pab-Mir-616_3p* |
| mirBase accession | None |
| Sequence |
39- AAGUCAUUGGAGGGUUUUGAGCAG -63
Get sequence
|
