| MirGeneDB ID | Cja-Mir-629 |
|---|---|
| Family name | MIR-629 (all species) |
| Seed | GGGUUUC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-629 Mml-Mir-629 Pab-Mir-629 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 14613838-14613898 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCUCCAUAUCCCUUUCCCAGGGGGAGGGGCUGGGUUUCCAUUGGGAGAACUUUUACCUUGAACUGGGAGGUUCUCCCAUUGGAAACCCAGCCCCUCCCCUCUGCCUGCCUCAACCCUACACGet precursor sequence |
| Structure | 10 20 30 40 50 GCUCCAUAUCCCUUUCC- -| U UUACCUU CAG GGGGAGGGGCUGGGUUUCCA UGGGAGAACUU \ GUC CCCCUCCCCGACCCAAAGGU ACCCUCUUGGA G CACAUCCCAACUCCGUCC U^ U GGGUCAA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-629_5p |
| mirBase accession | None |
| Sequence |
0- UGGGUUUCCAUUGGGAGAACUU -22
Get sequence
|
| Star sequence | Cja-Mir-629_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- GUUCUCCCAUUGGAAACCCAGC -61
Get sequence
|
