| MirGeneDB ID | Pab-Mir-629 |
|---|---|
| Family name | MIR-629 (all species) |
| Seed | GGGUUUA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-629 Hsa-Mir-629 Mml-Mir-629 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054695.2: 73292683-73292743 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGCUUCAUGUCCCUUUCCCAGGGGAGGGGCUGGGUUUACAUUGGGAGAACUUUUACCGUGAACCAGGAGGUUCUCCCAACAUAAGCCCAGCCCCUCCCCUCUGCCUGCCUCAACCCUACACGet precursor sequence |
| Structure | 10 20 30 40 50 UGCUUCAUGUCCCUUUCCC--| CA UUACCGU AGGGGAGGGGCUGGGUUUA UUGGGAGAACUU \ UCCCCUCCCCGACCCGAAU AACCCUCUUGGA G CACAUCCCAACUCCGUCCGUC^ AC GGACCAA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-629_5p |
| mirBase accession | None |
| Sequence |
0- UGGGUUUACAUUGGGAGAACUU -22
Get sequence
|
| Star sequence | Pab-Mir-629_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- GUUCUCCCAACAUAAGCCCAGC -61
Get sequence
|
