MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-629

Family name MIR-629 (all species)
Seed GGGUUUA
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Cja-Mir-629  Hsa-Mir-629  Mml-Mir-629 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054695.2: 73292683-73292743 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUUCAUGUCCCUUUCCCAGGGGAGGGGCUGGGUUUACAUUGGGAGAACUUUUACCGUGAACCAGGAGGUUCUCCCAACAUAAGCCCAGCCCCUCCCCUCUGCCUGCCUCAACCCUACAC
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Structure
        10          20        30        40        50          
UGCUUCAUGUCCCUUUCCC--|                  CA            UUACCGU 
                     AGGGGAGGGGCUGGGUUUA  UUGGGAGAACUU       \
                     UCCCCUCCCCGACCCGAAU  AACCCUCUUGGA       G
CACAUCCCAACUCCGUCCGUC^                  AC            GGACCAA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Li Li
Mature sequence

Pab-Mir-629_5p

mirBase accessionNone
Sequence
0- UGGGUUUACAUUGGGAGAACUU -22
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Star sequence

Pab-Mir-629_3p* (predicted)

mirBase accessionNone
Sequence
39- GUUCUCCCAACAUAAGCCCAGC -61
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