MirGeneDB ID | Dan-Mir-314 |
Family name |
MIR-314 (all species) |
Seed |
AUUCGAG |
Species |
Fruit fly (Drosophila ananassae) |
MiRBase ID |
dan-mir-314
|
Paralogues |
|
Orthologues |
Dme-Mir-314
Dmo-Mir-314
Dsi-Mir-314
Dya-Mir-314
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Drosophila
|
Genome context (Dana_caf1) |
scaffold_13337: 6019520-6019605 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UAUGACUGGGUUUUGGCCCGCACUCUUAUCGUAACUUGUGUGGCUUCGAAUGUACCUAGUUGAGGAAAAAUCAGUUUGGAUUUUGUUACCUCUGGUAUUCGAGCCAAUAAGUUCGGCCACGAAUUCGCAUUUUAUCUUUUGCAUUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60 70
UAUGACUGGGUUUUGGCCC AC-- UUA-| U G U AU UAGUUGAGGAAAAAUCAG
GC UC UCG AACUUGU UGGCU CGA GUACC \
CG AG GGC UUGAAUA ACCGA GCU UAUGG U
UUUACGUUUUCUAUUUUA- CUUA CACC^ - - - -- UCUCCAUUGUUUUAGGUU
140 130 120 110 100 90 80 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dan-Mir-314_5p* |
mirBase accession | None |
Sequence |
0- GUAACUUGUGUGGCUUCGAAUGUACC -26
Get sequence
|
Mature sequence |
Dan-Mir-314_3p |
mirBase accession | MIMAT0008465 |
Sequence |
65- UAUUCGAGCCAAUAAGUUCGG -86
Get sequence
|