MirGeneDB ID | Dsi-Mir-314 |
Family name |
MIR-314 (all species) |
Seed |
AUUCGAG |
Species |
Fruit fly (Drosophila simulans) |
MiRBase ID |
dsi-mir-314
|
Paralogues |
|
Orthologues |
Dan-Mir-314
Dme-Mir-314
Dmo-Mir-314
Dya-Mir-314
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Drosophila
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
3L: 11468004-11468091 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UAUAGCAGUGUUUUGGCCCGCACUCUUAUCGUAACUUGUGUGGCUUCGAAUGUACCUAGUUGAGGAAAAGUCCCGUGUCGGAUUUUGUUACCUCUGGUAUUCGAGCCAAUAAGUUCGGCCACGAAUUCGCAUUUUAUCUUUUUUUGCA
Get precursor sequence
|
Structure | 10 20 30 40 50 60 70
UAUAGCAGUGUUUUGGCCC AC-- UUA-| U G U AU UAGUUGAGGAAAAGUCCCG
GC UC UCG AACUUGU UGGCU CGA GUACC \
CG AG GGC UUGAAUA ACCGA GCU UAUGG U
ACGUUUUUUUCUAUUUUA- CUUA CACC^ - - - -- UCUCCAUUGUUUUAGGCUG
140 130 120 110 100 90 80 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dsi-Mir-314_5p* |
mirBase accession | None |
Sequence |
0- GUAACUUGUGUGGCUUCGAAUGUACC -26
Get sequence
|
Mature sequence |
Dsi-Mir-314_3p |
mirBase accession | MIMAT0008864 |
Sequence |
67- UAUUCGAGCCAAUAAGUUCGG -88
Get sequence
|