MirGeneDB 3.0

MirGeneDB ID

Dan-Mir-987

Family name MIR-987 (all species)
Seed AAAGUAA
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues Dme-Mir-987  Dmo-Mir-987  Dsi-Mir-987  Dya-Mir-987  Gpa-Mir-987 
Node of Origin (locus) Glossinidae + Drosophilidae
Node of Origin (family) Glossinidae + Drosophilidae
Genome context
(Dana_caf1)
scaffold_12430: 12744-12809 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACGGAAAAAUGUACAAUGUUGGACUGUGCUUAAAGUAAAUAGUCUGGAUUGAUGAAAGUUGUAUUCGAGAAUUCAUCAACAGGCAUUUACUUCAACUGCAGUUCGAACGAAAUUCAACAGGAUAAU
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Structure
        10          20        30        40        50        60    
ACGGAAAAAUGUACAAUG--|        GC  A        A     GA       AAGUUGUA 
                    UUGGACUGU  UU AAGUAAAU GUCUG  UUGAUGA        \
                    AGCUUGACG  AA UUCAUUUA CGGAC  AACUACU        U
UAAUAGGACAACUUAAAGCA^        UC  C        -     --       UAAGAGCU 
    120       110       100        90         80          70
Deep sequencing
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CommentThere are Dicer cuts +1 and -1.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Fe
Mature sequence

Dan-Mir-987_5p

mirBase accessionNone
Sequence
0- UAAAGUAAAUAGUCUGGAUUGAUGA -25
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Star sequence

Dan-Mir-987_3p*

mirBase accessionNone
Sequence
44- AUCAACAGGCAUUUACUUCAAC -66
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