MirGeneDB ID | Dmo-Mir-987 |
Family name |
MIR-987 (all species) |
Seed |
AAAGUAA |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Dan-Mir-987
Dme-Mir-987
Dsi-Mir-987
Dya-Mir-987
Gpa-Mir-987
|
Node of Origin (locus) |
Glossinidae + Drosophilidae
|
Node of Origin (family) |
Glossinidae + Drosophilidae
|
Genome context (Dmoj_caf1) |
scaffold_6496: 4307064-4307129 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAUAUCGCGAAUAAACUGUUGAACUGUGCUUAAAGUAAAUAGUCUGGAUUGAUGAAAGUUUAUAUCUAAGAAUUCAUCAACAGGCAUUUACUUCAACUGCAGUUUAAACGAAAUGCAACAGAAGCA
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|
Structure | 10 20 30 40 50 60
GAUAUCGCGAAUAAACUG-| GC A A GA AGUUUAU
UUGAACUGU UU AAGUAAAU GUCUG UUGAUGAA A
AAUUUGACG AA UUCAUUUA CGGAC AACUACUU U
ACGAAGACAACGUAAAGCA^ UC C - -- AAGAAUC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Mature sequence |
Dmo-Mir-987_5p |
mirBase accession | None |
Sequence |
0- UAAAGUAAAUAGUCUGGAUUGAUGAA -26
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|
Star sequence |
Dmo-Mir-987_3p* |
mirBase accession | None |
Sequence |
44- CAUCAACAGGCAUUUACUUCAA -66
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|