| MirGeneDB ID | Dan-Novel-12-P1 |
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| Family name |
DAN-NOVEL-12 (all species) |
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| Seed |
AAAGCUG |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
Dan-Novel-12-P2
|
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| Orthologues |
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| Node of Origin (locus) |
D. ananassae
|
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| Node of Origin (family) |
D. ananassae
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Genome context
(Dana_caf1) |
scaffold_13045: 592980-593037 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAAUACGUGUGCCCUUGCAUUCUCUGGCCAAAAGCUGGCGGAAAAAAUCGUCUUGAAUAUCUGACGAUUUGUUUCGGCAGCUUUUGGCCAAAGAAUAUUUUCGUCCAAGAACAUCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAAUACGUGUGCCCUUGC--| C G A CUUGA
AUUCU UGGCCAAAAGCUG CGGAA AAAUCGU A
UAAGA ACCGGUUUUCGAC GCUUU UUUAGCA U
GACUACAAGAACCUGCUUUUA^ A G G GUCUA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
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|
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| Mature sequence |
Dan-Novel-12-P1_5p |
| mirBase accession | None |
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| Sequence |
0- AAAAGCUGGCGGAAAAAAUCGU -22
Get sequence
|
|---|
| Co-mature sequence |
Dan-Novel-12-P1_3p |
| mirBase accession | None |
|---|
| Sequence |
36- GAUUUGUUUCGGCAGCUUUUGG -58
Get sequence
|
|---|
