MirGeneDB ID | Dan-Novel-12-P2 |
Family name |
DAN-NOVEL-12 (all species) |
Seed |
AAAGCUG |
Species |
Fruit fly (Drosophila ananassae) |
MiRBase ID |
|
Paralogues |
Dan-Novel-12-P1
|
Orthologues |
|
Node of Origin (locus) |
D. ananassae
|
Node of Origin (family) |
D. ananassae
|
Genome context (Dana_caf1) |
scaffold_13045: 602935-602992 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAAAUACGUGUGCCCUUGCAUUCUCUGGCCAAAAGCUGGCGGAAAAAAUCGUCUUGAAUAUCUGACGAUUUGUUUCGGCAGCUUUUGGCCAAAGAAUAUUUUCGUCCAAGAACAUCAG
Get precursor sequence
|
Structure | 10 20 30 40 50
AAAAUACGUGUGCCCUUGC--| C G A CUUGA
AUUCU UGGCCAAAAGCUG CGGAA AAAUCGU A
UAAGA ACCGGUUUUCGAC GCUUU UUUAGCA U
GACUACAAGAACCUGCUUUUA^ A G G GUCUA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Mature sequence |
Dan-Novel-12-P2_5p |
mirBase accession | None |
Sequence |
0- AAAAGCUGGCGGAAAAAAUCGU -22
Get sequence
|
Co-mature sequence |
Dan-Novel-12-P2_3p |
mirBase accession | None |
Sequence |
36- GAUUUGUUUCGGCAGCUUUUGG -58
Get sequence
|