MirGeneDB ID | Dan-Novel-16 |
Family name |
DAN-NOVEL-16 (all species) |
Seed |
GUCAGGG |
Species |
Fruit fly (Drosophila ananassae) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
D. ananassae
|
Node of Origin (family) |
D. ananassae
|
Genome context (Dana_caf1) |
scaffold_13322: 1691-1751 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUCACUCGAGGAACUAACAAAUUCAAUUUCAUGCCCGCUUGCCCUCGUGACUUUGGAAAAUGGCGGAAAAGUCAGGGGGGAAGUGGGCUGAAAUCGGAGCAAAAUCAAGCCAGUUCCGGUC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUCACUCGAGGAACUAACAAA--| A U G G GGAAAA
UUC AUUUCA GCCCGCUU CCCUC UGACUUU \
AGG UAAAGU CGGGUGAA GGGGG ACUGAAA U
CUGGCCUUGACCGAACUAAAACG^ C - - G AGGCGG
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dan-Novel-16_5p* |
mirBase accession | None |
Sequence |
0- AUGCCCGCUUGCCCUCGUGACUUU -24
Get sequence
|
Mature sequence |
Dan-Novel-16_3p |
mirBase accession | None |
Sequence |
39- AGUCAGGGGGGAAGUGGGCUGA -61
Get sequence
|