MirGeneDB 2.1
35 microRNA genes with node of origin Neognathae
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Cli-Mir-458-as None MIR-458 UAGCUCU None None scaffold636 126030 126087 - Neognathae Osteichthyes No 1
Gga-Mir-458-as gga-mir-458b MIR-458 UAGCUCU MIMAT0025830 MIMAT0025831 13 8954786 8954843 + Neognathae Osteichthyes No 1
Cli-Mir-1451 cli-mir-1451 MIR-1451 CGCACAG MIMAT0038678 MIMAT0038679 scaffold99 1351156 1351214 + Neognathae Neognathae No 1
Gga-Mir-1451 gga-mir-1451 MIR-1451 CGCACAG MIMAT0007324 MIMAT0007325 3 75994583 75994641 + Neognathae Neognathae No 1
Tgu-Mir-1451 tgu-mir-1451 MIR-1451 CGCACAG MIMAT0014451 MIMAT0026958 3 36306128 36306186 - Neognathae Neognathae No 1
Cli-Mir-1467 cli-mir-1467 MIR-1467 UCACACC MIMAT0038680 MIMAT0038681 scaffold216 4187745 4187809 - Neognathae Neognathae No 1
Gga-Mir-1467 gga-mir-1467-1 MIR-1467 CACACCA MIMAT0007345 MIMAT0007346 2 135915053 135915117 - Neognathae Neognathae No 1
Tgu-Mir-1467 tgu-mir-1467-1 MIR-1467 UCACACC MIMAT0025399 MIMAT0027342 2 137325683 137325747 - Neognathae Neognathae No 1
Cli-Mir-1552 cli-mir-1552 MIR-1552 UAGUGCG MIMAT0038683 MIMAT0038684 scaffold160 1494072 1494129 - Neognathae Neognathae No
Gga-Mir-1552 gga-mir-1552 MIR-1552 UAGUGCG MIMAT0007407 MIMAT0007408 1 134912431 134912488 + Neognathae Neognathae No
Tgu-Mir-1552 None MIR-1552 GCUAGCU None None Tgu-Mir-1552_pre_1:30042988-30043131 44 101 - Neognathae Neognathae No
Cli-Mir-1559 cli-mir-1559 MIR-1559 UCGAUGC MIMAT0038685 MIMAT0038686 scaffold159 524666 524725 - Neognathae Neognathae Unknown
Gga-Mir-1559 gga-mir-1559 MIR-1559 UCGAUGC MIMAT0007416 MIMAT0026775 7 1375491 1375550 - Neognathae Neognathae No 1
Tgu-Mir-1559 tgu-mir-1559 MIR-1559 UCGAUGC None MIMAT0014526 7 26224204 26224263 - Neognathae Neognathae Unknown 1
Cli-Mir-1677-P5 cli-mir-1803-1 MIR-1677 UUGACUU MIMAT0038703 MIMAT0038704 scaffold173 2790627 2790680 + Neognathae Diapsida No
Gga-Mir-1677-P5 gga-mir-1803 MIR-1677 UUGACUU None MIMAT0007720 2 92556457 92556510 + Neognathae Diapsida No
Tgu-Mir-1677-P5 tgu-mir-1803 MIR-1677 UUGACUU MIMAT0026965 MIMAT0014472 2 94474915 94474969 + Neognathae Diapsida No
Cli-Mir-1677-P6 None MIR-1677 UGACUUA None None scaffold231 75600 75657 + Neognathae Diapsida No
Gga-Mir-1677-P6 None MIR-1677 UGACUUA None None 2 83618413 83618470 + Neognathae Diapsida No
Tgu-Mir-1677-P6 None MIR-1677 UGACUUA None None 2 85363381 85363438 + Neognathae Diapsida No
Cli-Mir-1729 cli-mir-1729 MIR-1729 UCCCUUA MIMAT0038695 MIMAT0038696 scaffold20 27908 27969 + Neognathae Neognathae No
Gga-Mir-1729 gga-mir-1729 MIR-1729 UCCCUUA MIMAT0007629 MIMAT0007630 15 1058322 1058384 + Neognathae Neognathae No
Tgu-Mir-1729 tgu-mir-1729 MIR-1729 UCCCUUA MIMAT0014467 MIMAT0026963 15 6583448 6583510 + Neognathae Neognathae No
Cli-Mir-1781 cli-mir-1781 MIR-1781 UUAAAUC None MIMAT0038697 scaffold146 3197333 3197391 + Neognathae Neognathae No
Gga-Mir-1781 gga-mir-1781 MIR-1781 UUAAAUC MIMAT0007692 MIMAT0007693 14 3720530 3720588 - Neognathae Neognathae No
Tgu-Mir-1781 tgu-mir-1781 MIR-1781 UUUAAAU None MIMAT0025406 14 3993241 3993300 - Neognathae Neognathae No
Cli-Mir-2131 cli-mir-2131 MIR-2131 UGCAGAA MIMAT0038707 MIMAT0038708 scaffold476 26740 26804 - Neognathae Neognathae No
Gga-Mir-2131 gga-mir-2131 MIR-2131 UGCAGAA MIMAT0011207 MIMAT0026920 Z 70948215 70948279 - Neognathae Neognathae No
Tgu-Mir-2131 tgu-mir-2131 MIR-2131 UGCAGAA MIMAT0025410 None Z 39830270 39830334 - Neognathae Neognathae Unknown
Cli-Mir-2954 cli-mir-2954 MIR-2954 AUCCCCA MIMAT0038711 MIMAT0038712 scaffold476 14816 14876 + Neognathae Neognathae Yes 1 1
Gga-Mir-2954 gga-mir-2954 MIR-2954 AUCCCCA None MIMAT0014448 Z 70937428 70937488 + Neognathae Neognathae Yes 1 1
Tgu-Mir-2954 tgu-mir-2954 MIR-2954 AUCCCCA MIMAT0014623 MIMAT0014474 Z 39812452 39812511 + Neognathae Neognathae Yes 1
Cli-Mir-2984 cli-mir-2984 MIR-2984 GCCUGCU MIMAT0038715 None scaffold167 918738 918804 + Neognathae Neognathae Yes 1
Gga-Mir-2984 gga-mir-2984 MIR-2984 GCCUGCU MIMAT0049894 MIMAT0049895 1 145954986 145955052 - Neognathae Neognathae Yes 1
Tgu-Mir-2984 tgu-mir-2984 MIR-2984 GCCUGCU MIMAT0014494 MIMAT0026970 1 75112556 75112622 + Neognathae Neognathae No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all