| MirGeneDB ID | Dmo-Novel-7-P2 |
|---|
| Family name |
DMO-NOVEL-7 (all species) |
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| Seed |
CUGCAUG |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
Dmo-Novel-7-P1
Dmo-Novel-7-P3
Dmo-Novel-7-P4
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| Orthologues |
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| Node of Origin (locus) |
D. mojavensis
|
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| Node of Origin (family) |
D. mojavensis
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Genome context
(Dmoj_caf1) |
scaffold_6308: 1299769-1299834 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCCUGCCAGCAAAAUUUUUAGUCUAUGGGCUCUGCAUGAUGGGUCUUUUAAAGGUUUUUUUUAAUAUAUAUUUUUAAAAGAGCCGUCUUGCAAAAUUCAAGGGCUAAAUAAGCAACGAAGCGUGUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCCUGCCAGCAAAAUUU--| A CUC U G GGUUUUUUU
UUAGUCU UGGG UGCA GAUGG UCUUUUAAA U
AAUCGGG ACUU ACGU CUGCC AGAAAAUUU A
GUGUGCGAAGCAACGAAUA^ A AAA U G UUAUAUAUA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dmo-Novel-7-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCUGCAUGAUGGGUCUUUUAAA -22
Get sequence
|
|---|
| Co-mature sequence |
Dmo-Novel-7-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
44- UAAAAGAGCCGUCUUGCAAAAU -66
Get sequence
|
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