| MirGeneDB ID | Dmo-Novel-5-P1a |
|---|
| Family name |
DMO-NOVEL-5 (all species) |
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| Seed |
GCGAGCU |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
Dmo-Novel-5-P1b
Dmo-Novel-5-P2
Dmo-Novel-5-P3
Dmo-Novel-5-P4
Dmo-Novel-5-P5
|
|---|
| Orthologues |
|
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| Node of Origin (locus) |
D. mojavensis
|
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| Node of Origin (family) |
D. mojavensis
|
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Genome context
(Dmoj_caf1) |
scaffold_6308: 1308226-1308286 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUUGCAAAAAUCUAAGUUAAAUCAUUUGUUUGCGAGCUAUAACCUAGUGGAGUACGCUUAUAUUCCGUAUCACUAAGUUAUAGACCGCUGACAAAAUGCUUUACUUUGCAAAAGGAAAAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUGCAAAAAUCUAAGU- U -| U AG C AGUACGCUU
UAAA CA UUUGUU GCG CUAUAAC UAGUGG \
AUUU GU AAACAG CGC GAUAUUG AUCACU A
UUAAAAGGAAAACGUUUC C A^ U CA A AUGCCUUAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Dmo-Novel-5-P1a_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGCGAGCUAUAACCUAGUGGAG -22
Get sequence
|
|---|
| Co-mature sequence |
Dmo-Novel-5-P1a_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UCACUAAGUUAUAGACCGCUGA -61
Get sequence
|
|---|
