| MirGeneDB ID | Dmo-Novel-6 |
|---|
| Family name |
DMO-NOVEL-6 (all species) |
|---|
| Seed |
GUGGCAU |
|---|
| Species |
Fruit fly (Drosophila mojavensis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
D. mojavensis
|
|---|
| Node of Origin (family) |
D. mojavensis
|
|---|
Genome context
(Dmoj_caf1) |
scaffold_6359: 2105839-2105905 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAACUGACUGUUUUUGUGUGUUGUACGGACAGUGGCAUCGACGACGACGACGACGGCGGCAGAGAAACGGUCGUCGUUGUCGUUGUCGUUGCCUCCGUUUCGUUCAAUUGAGCGCAGCAGCAACAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAACUGACUGUUUUUGUGU U -| AGU U ACGGCGGCAG
GUUG ACG GAC GGCA CGACGACGACGACG A
UAAC UGC UUG CCGU GCUGUUGCUGUUGC G
CGACAACGACGACGCGAGU U U^ CCU U UGCUGGCAAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Dmo-Novel-6_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGUGGCAUCGACGACGACGACG -22
Get sequence
|
|---|
| Star sequence |
Dmo-Novel-6_3p* |
| mirBase accession | None |
|---|
| Sequence |
46- UUGUCGUUGUCGUUGCCUCCG -67
Get sequence
|
|---|
