MirGeneDB 2.1

MirGeneDB ID

Dmo-Novel-6

Family name DMO-NOVEL-6 (all species)
Seed GUGGCAU
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. mojavensis
Node of Origin (family) D. mojavensis
Genome context
(Dmoj_caf1)
scaffold_6359: 2105839-2105905 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAACUGACUGUUUUUGUGUGUUGUACGGACAGUGGCAUCGACGACGACGACGACGGCGGCAGAGAAACGGUCGUCGUUGUCGUUGUCGUUGCCUCCGUUUCGUUCAAUUGAGCGCAGCAGCAACAGC
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Structure
        10        20         30        40        50        60   
AAACUGACUGUUUUUGUGU    U   -|  AGU    U              ACGGCGGCAG 
                   GUUG ACG GAC   GGCA CGACGACGACGACG          A
                   UAAC UGC UUG   CCGU GCUGUUGCUGUUGC          G
CGACAACGACGACGCGAGU    U   U^  CCU    U              UGCUGGCAAA 
     120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Em Fe Ma Ma
Mature sequence

Dmo-Novel-6_5p

mirBase accessionNone
Sequence
0- AGUGGCAUCGACGACGACGACG -22
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Star sequence

Dmo-Novel-6_3p*

mirBase accessionNone
Sequence
46- UUGUCGUUGUCGUUGCCUCCG -67
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