| MirGeneDB ID | Dmo-Novel-9 |
|---|
| Family name |
DMO-NOVEL-9 (all species) |
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| Seed |
AAUGCAU |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
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| Node of Origin (locus) |
D. mojavensis
|
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| Node of Origin (family) |
D. mojavensis
|
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Genome context
(Dmoj_caf1) |
scaffold_6308: 1301213-1301269 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUACAUGGCUCUAUAUUGAUAUACACAUAUAAAUGCAUACAUAAACACAUGUAUGUCUAUUUUUACAUGUGUUAUGUAUGCAUAUCUAUGUCUAUAUUGGAAUGCAUAGGUGCCUAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUACAUGGCUCUAUAUU--| C UAA A UGUC
GAUAUA ACAUA AUGCAUACAUAA CACAUGUA U
UUAUAU UGUAU UACGUAUGUAUU GUGUACAU A
AAUCCGUGGAUACGUAAGG^ C CUA - UUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Dmo-Novel-9_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AAAUGCAUACAUAAACACAUGUA -23
Get sequence
|
|---|
| Star sequence |
Dmo-Novel-9_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- CAUGUGUUAUGUAUGCAUAUCU -57
Get sequence
|
|---|
