| MirGeneDB ID | Dmo-Novel-4 |
|---|
| Family name |
DMO-NOVEL-4 (all species) |
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| Seed |
UGAGCAU |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
|
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| Node of Origin (locus) |
D. mojavensis
|
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| Node of Origin (family) |
D. mojavensis
|
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Genome context
(Dmoj_caf1) |
scaffold_6308: 1307557-1307617 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AUAUAAUAUACAUACAUAUAUAUAGAUACACAUAUGCGAUGUUUGCUCAAAAUUUGGUUCGAUAUAGUUCUGAGCAUAUGUUGCAUACAUGUAUAUAUAUAUUUGAGCAUCACUGAUUGUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUAUAAUAUACAUACAU--| G CA U AAAUUUGGUU
AUAUAUA AUACA UAUGCGAUGU UGCUCA \
UAUAUAU UAUGU AUACGUUGUA ACGAGU C
CUGUUAGUCACUACGAGUU^ A AC U CUUGAUAUAG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dmo-Novel-4_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CAUAUGCGAUGUUUGCUCAAAA -22
Get sequence
|
|---|
| Mature sequence |
Dmo-Novel-4_3p |
| mirBase accession | None |
|---|
| Sequence |
39- CUGAGCAUAUGUUGCAUACAUG -61
Get sequence
|
|---|
