| MirGeneDB ID | Dmo-Novel-1 |
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| Family name |
DMO-NOVEL-1 (all species) |
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| Seed |
CUGCACG |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. mojavensis
|
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| Node of Origin (family) |
D. mojavensis
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Genome context
(Dmoj_caf1) |
scaffold_6308: 1299051-1299113 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCCAGCAAAGGAAAUUUUUAGUCUAUGGGUUCUGCACGGUGGCUCUUUUAAAAGUUUUUUAUAUAUACUGUUAAAAUGGCCGUCAUGCAAAAUUCAAGGGCUAAAUAAGCAACGAAACGUGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCCAGCAAAGGAAAUUU--| A C C GU C AAGUUUUUU
UUAGUCU UGGGUU UGCA G GGCU UUUUAA \
AAUCGGG ACUUAA ACGU C CCGG AAAAUU A
ACGUGCAAAGCAACGAAUA^ A A A UG U GUCAUAUAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dmo-Novel-1_5p |
| mirBase accession | None |
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| Sequence |
0- UCUGCACGGUGGCUCUUUUAAA -22
Get sequence
|
|---|
| Star sequence |
Dmo-Novel-1_3p* |
| mirBase accession | None |
|---|
| Sequence |
41- UAAAAUGGCCGUCAUGCAAAAU -63
Get sequence
|
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