MirGeneDB ID | Dan-Novel-17 |
Family name |
DAN-NOVEL-17 (all species) |
Seed |
AUUUUGG |
Species |
Fruit fly (Drosophila ananassae) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
D. ananassae
|
Node of Origin (family) |
D. ananassae
|
Genome context (Dana_caf1) |
scaffold_13340: 7931528-7931586 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUAGCCGCCUUCUCUCCAAUGAGGGCUUCGCAUUUUGGACAUUCUGCUUUCAAUUCCCGCGGAACUGAAAGCCUAAUGCCCAGAAAGCGAGGCCUCCAUUGUAGAGAAUGCGGCUAGAG
Get precursor sequence
|
Structure | 10 20 30 40 50
CUAGCCGCCUUCUCUCC--| AG A A CU AUUCCC
AAUG GGCUUCGC UUUUGG CAUU GCUUUCA \
UUAC CCGGAGCG AAGACC GUAA CGAAAGU G
GAGAUCGGCGUAAGAGAUG^ CU A C UC CAAGGC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Dan-Novel-17_5p |
mirBase accession | None |
Sequence |
0- CAUUUUGGACAUUCUGCUUUCA -22
Get sequence
|
Co-mature sequence |
Dan-Novel-17_3p |
mirBase accession | None |
Sequence |
37- AAAGCCUAAUGCCCAGAAAGCG -59
Get sequence
|