MirGeneDB 3.0

MirGeneDB ID

Dan-Novel-17

Family name DAN-NOVEL-17 (all species)
Seed AUUUUGG
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. ananassae
Node of Origin (family) D. ananassae
Genome context
(Dana_caf1)
scaffold_13340: 7931528-7931586 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUAGCCGCCUUCUCUCCAAUGAGGGCUUCGCAUUUUGGACAUUCUGCUUUCAAUUCCCGCGGAACUGAAAGCCUAAUGCCCAGAAAGCGAGGCCUCCAUUGUAGAGAAUGCGGCUAGAG
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Structure
        10          20        30        40        50         
CUAGCCGCCUUCUCUCC--|   AG        A      A    CU       AUUCCC 
                   AAUG  GGCUUCGC UUUUGG CAUU  GCUUUCA      \
                   UUAC  CCGGAGCG AAGACC GUAA  CGAAAGU      G
GAGAUCGGCGUAAGAGAUG^   CU        A      C    UC       CAAGGC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe
Mature sequence

Dan-Novel-17_5p

mirBase accessionNone
Sequence
0- CAUUUUGGACAUUCUGCUUUCA -22
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Co-mature sequence

Dan-Novel-17_3p

mirBase accessionNone
Sequence
37- AAAGCCUAAUGCCCAGAAAGCG -59
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